Metagenomic Binning WorkshopΒΆ

In this metagenomics workshop we will learn how to:

  • Perform unsupervised binning with concoct
  • Evaluate binning performance

The workshop has the following exercises:

  1. Setup Environment
  2. Running Concoct
  3. Evaluate Clustering Using Single Copy Genes
  4. Phylogenetic Classification using Phylosift

At least a basic knowledge of how to work with the command line is required otherwise it will be very difficult to follow some of the examples. Have fun!